Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | A6122_RS08335 | Not Available | Positive | 1824652 - 1824912 | 9080.07 |
| dna polymerase iii subunit delta | A6122_RS08340 | Not Available | Negative | 1825165 - 1826193 | 35876.7 |
| comec/rec2 family competence protein | A6122_RS08345 | Not Available | Negative | 1826198 - 1828588 | 81035.8 |
| comea family dna-binding protein | A6122_RS08350 | Not Available | Negative | 1828585 - 1829223 | 21068.2 |
| hypothetical protein | A6122_RS08355 | Not Available | Negative | 1829343 - 1829504 | 6018.5 |
| hypothetical protein | A6122_RS16495 | Not Available | Negative | 1829572 - 1830150 | 19240.7 |
| transposase family protein | A6122_RS08360 | Not Available | Positive | 1830247 - 1830828 | 21399.5 |
| transposase family protein | A6122_RS08365 | Not Available | Positive | 1830909 - 1831664 | 28640.2 |
| hypothetical protein | A6122_RS16500 | Not Available | Positive | 1831657 - 1831914 | 10252.4 |
| leucine--trna ligase | A6122_RS08370 | Not Available | Negative | 1832113 - 1834695 | 96326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
