Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | A6122_RS08235 | Not Available | Negative | 1802659 - 1803411 | 26794.4 |
| isoprenyl transferase | A6122_RS08240 | Not Available | Negative | 1803545 - 1804348 | 30243.2 |
| dna repair protein reco | A6122_RS08245 | Not Available | Negative | 1804345 - 1805067 | 25685.7 |
| trimeric intracellular cation channel family protein | A6122_RS08250 | Not Available | Positive | 1805162 - 1805830 | 23215.1 |
| 2-isopropylmalate synthase | A6122_RS08255 | Not Available | Negative | 1805862 - 1807634 | 64926.7 |
| response regulator transcription factor | A6122_RS08260 | Not Available | Negative | 1807859 - 1808527 | 23972.8 |
| sensor histidine kinase | A6122_RS08265 | Not Available | Negative | 1808524 - 1810263 | 59018.4 |
| gtpase era | A6122_RS08270 | Not Available | Negative | 1810335 - 1811246 | 33286.3 |
| hemolysin family protein | A6122_RS08275 | Not Available | Negative | 1811243 - 1812619 | 48644.0 |
| rrna maturation rnase ybey | A6122_RS08280 | Not Available | Negative | 1812628 - 1813089 | 16834.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
