Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2017 domain-containing protein | A6122_RS00775 | Not Available | Positive | 177322 - 177846 | 18912.1 |
| duf1206 domain-containing protein | A6122_RS00780 | Not Available | Positive | 178023 - 178442 | 13857.4 |
| hypothetical protein | A6122_RS00785 | Not Available | Positive | 178567 - 179037 | 16606.1 |
| atp-dependent clp protease atp-binding subunit | A6122_RS00790 | Not Available | Positive | 179111 - 181267 | 79149.8 |
| radc family protein | A6122_RS00795 | Not Available | Positive | 181492 - 182139 | 22192.9 |
| zinc-dependent alcohol dehydrogenase family protein | A6122_RS00800 | Not Available | Positive | 182298 - 183347 | 36432.4 |
| ammonia-dependent nad(+) synthetase | A6122_RS00805 | Not Available | Negative | 183946 - 184767 | 29253.4 |
| acetate--coa ligase | A6122_RS00810 | Not Available | Negative | 185237 - 187234 | 72169.9 |
| abc transporter permease | A6122_RS00815 | Not Available | Negative | 187279 - 188199 | 32209.9 |
| aliphatic sulfonate abc transporter substrate-binding protein | A6122_RS00820 | Not Available | Negative | 188251 - 189321 | 36162.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
