Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | A6122_RS08185 | Not Available | Negative | 1789629 - 1790498 | 31076.1 |
| abc transporter atp-binding protein | A6122_RS08190 | Not Available | Negative | 1790495 - 1792222 | 61682.4 |
| abc transporter permease | A6122_RS08195 | Not Available | Negative | 1792219 - 1793274 | 37029.6 |
| abc transporter permease | A6122_RS08200 | Not Available | Negative | 1793277 - 1794356 | 38631.9 |
| abc transporter substrate-binding protein | A6122_RS08205 | Not Available | Negative | 1794423 - 1796060 | 57585.1 |
| dna primase | A6122_RS08210 | Not Available | Negative | 1796297 - 1798156 | 67772.7 |
| deoxyguanosinetriphosphate triphosphohydrolase | A6122_RS08215 | Not Available | Negative | 1798485 - 1799735 | 46296.8 |
| trna dihydrouridine synthase dusb | A6122_RS08220 | Not Available | Negative | 1799728 - 1800954 | 43286.6 |
| aminoacyl-trna deacylase | A6122_RS08225 | Not Available | Positive | 1801018 - 1801515 | 17431.8 |
| aminotransferase class v-fold plp-dependent enzyme | A6122_RS08230 | Not Available | Negative | 1801520 - 1802587 | 37417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
