Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS08100 | Not Available | Positive | 1775033 - 1775620 | 22113.6 |
| lon peptidase substrate-binding domain-containing protein | A6122_RS08105 | Not Available | Negative | 1775634 - 1776245 | 22555.7 |
| hypothetical protein | A6122_RS08110 | Not Available | Positive | 1776412 - 1776933 | 18131.0 |
| hypothetical protein | A6122_RS08115 | Not Available | Positive | 1776997 - 1777233 | 8267.49 |
| hypothetical protein | A6122_RS16470 | Not Available | Negative | 1777473 - 1777994 | 17529.8 |
| fic family protein | A6122_RS08120 | Not Available | Negative | 1778289 - 1778954 | 24515.2 |
| Trna-met | Not Available | Not Available | Positive | 1779017 - 1779090 | Not Available |
| glycosyltransferase | A6122_RS16475 | Not Available | Negative | 1779113 - 1780357 | 45070.9 |
| dmt family transporter | A6122_RS16480 | Not Available | Negative | 1780490 - 1781392 | 31151.2 |
| peptide deformylase | A6122_RS08140 | Not Available | Positive | 1781497 - 1782063 | 20902.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
