Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase iii | A6122_RS08050 | Not Available | Positive | 1764878 - 1765882 | 35079.6 |
| acyl carrier protein | A6122_RS08055 | Not Available | Positive | 1765957 - 1766205 | 8868.39 |
| beta-ketoacyl synthase | A6122_RS08060 | Not Available | Positive | 1766283 - 1767518 | 42878.8 |
| duf3145 domain-containing protein | A6122_RS08065 | Not Available | Negative | 1767593 - 1768096 | 18317.7 |
| padr family transcriptional regulator | A6122_RS08070 | Not Available | Positive | 1768311 - 1768925 | 21772.4 |
| hypothetical protein | A6122_RS08075 | Not Available | Positive | 1768936 - 1770264 | 45992.7 |
| bifunctional 3'-5' exonuclease/dna polymerase | A6122_RS08080 | Not Available | Negative | 1770314 - 1771918 | 56786.9 |
| hypothetical protein | A6122_RS08085 | Not Available | Negative | 1772005 - 1772295 | 11001.2 |
| mfs transporter | A6122_RS08090 | Not Available | Positive | 1772712 - 1774061 | 46135.4 |
| glycosyltransferase family 2 protein | A6122_RS08095 | Not Available | Negative | 1774088 - 1774864 | 28667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
