Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-phospho-l-lactate transferase | A6122_RS08000 | Not Available | Positive | 1755653 - 1756639 | 34223.9 |
| patatin-like phospholipase family protein | A6122_RS08005 | Not Available | Positive | 1756689 - 1757582 | 30019.3 |
| dihydrofolate reductase family protein | A6122_RS08010 | Not Available | Negative | 1757557 - 1758105 | 20604.2 |
| hypothetical protein | A6122_RS08015 | Not Available | Positive | 1758329 - 1758634 | 12053.3 |
| lysr family transcriptional regulator | A6122_RS08020 | Not Available | Positive | 1758722 - 1759066 | 12200.8 |
| Trna-val | Not Available | Not Available | Positive | 1759082 - 1759154 | Not Available |
| peroxiredoxin | A6122_RS08030 | Not Available | Negative | 1759228 - 1759701 | 17289.6 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | A6122_RS08035 | Not Available | Positive | 1759917 - 1762643 | 101044.0 |
| cdar family transcriptional regulator | A6122_RS08040 | Not Available | Positive | 1762655 - 1763851 | 43303.8 |
| acp s-malonyltransferase | A6122_RS08045 | Not Available | Positive | 1763940 - 1764863 | 30873.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
