Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease signature motif containing protein | A6122_RS07950 | Not Available | Positive | 1745863 - 1747212 | 47858.6 |
| amidase family protein | A6122_RS07955 | Not Available | Negative | 1747238 - 1748557 | 44095.5 |
| yoak family protein | A6122_RS07960 | Not Available | Positive | 1748815 - 1749525 | 23835.0 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | A6122_RS07965 | Not Available | Negative | 1749535 - 1750449 | 32746.3 |
| ribonuclease iii | A6122_RS07970 | Not Available | Negative | 1750452 - 1751141 | 23868.7 |
| 50s ribosomal protein l32 | A6122_RS07975 | Not Available | Negative | 1751233 - 1751436 | 7501.14 |
| duf177 domain-containing protein | A6122_RS07980 | Not Available | Negative | 1751456 - 1752001 | 19415.0 |
| tigr03842 family llm class f420-dependent oxidoreductase | A6122_RS07985 | Not Available | Negative | 1752110 - 1753126 | 37310.2 |
| dihydropyrimidinase | A6122_RS07990 | Not Available | Negative | 1753172 - 1754611 | 51664.3 |
| nitrilase-related carbon-nitrogen hydrolase | A6122_RS07995 | Not Available | Negative | 1754637 - 1755485 | 32155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
