Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | A6122_RS07750 | Not Available | Negative | 1705252 - 1705953 | 24688.2 |
| signal peptidase i | A6122_RS07755 | Not Available | Negative | 1705954 - 1706769 | 29312.7 |
| 50s ribosomal protein l19 | A6122_RS07760 | Not Available | Negative | 1706895 - 1707242 | 13010.8 |
| hypothetical protein | A6122_RS07765 | Not Available | Negative | 1707429 - 1707914 | 17051.9 |
| type i methionyl aminopeptidase | A6122_RS07770 | Not Available | Positive | 1707973 - 1708740 | 27002.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | A6122_RS07775 | Not Available | Negative | 1708864 - 1709547 | 24889.8 |
| ribosome maturation factor rimm | A6122_RS07780 | Not Available | Negative | 1709544 - 1710203 | 23732.1 |
| rna-binding protein | A6122_RS07785 | Not Available | Negative | 1710206 - 1710442 | 8406.19 |
| 30s ribosomal protein s16 | A6122_RS07790 | Not Available | Negative | 1710446 - 1710856 | 14945.9 |
| glutamate--cysteine ligase | A6122_RS07795 | Not Available | Positive | 1711182 - 1712327 | 42479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
