Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | A6122_RS15395 | Not Available | Negative | 166657 - 167427 | 28673.6 |
| hypothetical protein | A6122_RS00730 | Not Available | Negative | 167519 - 167863 | 11966.0 |
| hypothetical protein | A6122_RS00735 | Not Available | Positive | 168610 - 169620 | 36048.2 |
| m13 family metallopeptidase | A6122_RS00740 | Not Available | Positive | 169750 - 171714 | 72662.1 |
| serine hydrolase | A6122_RS00745 | Not Available | Positive | 171876 - 172778 | 31912.1 |
| hypothetical protein | A6122_RS00750 | Not Available | Positive | 172939 - 173133 | 6775.49 |
| duf4190 domain-containing protein | A6122_RS00755 | Not Available | Positive | 173308 - 173982 | 22931.7 |
| bcct family transporter | A6122_RS00760 | Not Available | Negative | 174014 - 175708 | 60350.9 |
| llm class f420-dependent oxidoreductase | A6122_RS00765 | Not Available | Positive | 175813 - 176739 | 33284.3 |
| atp-dependent clp protease adapter clps | A6122_RS00770 | Not Available | Positive | 176964 - 177254 | 11000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
