Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16465 | Not Available | Negative | 1666519 - 1666803 | 9897.34 |
| nad-dependent dna ligase liga | A6122_RS07605 | Not Available | Negative | 1667143 - 1669602 | 85963.6 |
| trna 2-thiouridine(34) synthase mnma | A6122_RS07610 | Not Available | Negative | 1669599 - 1670720 | 39445.7 |
| cysteine desulfurase family protein | A6122_RS07615 | Not Available | Negative | 1670761 - 1671984 | 41574.4 |
| glycogen debranching protein glgx | A6122_RS07620 | Not Available | Positive | 1672049 - 1674121 | 75809.6 |
| cys-trna(pro) deacylase | A6122_RS07625 | Not Available | Positive | 1674121 - 1674603 | 16546.0 |
| alpha-glucan family phosphorylase | A6122_RS07630 | Not Available | Negative | 1674723 - 1677296 | 93978.3 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | A6122_RS07635 | Not Available | Positive | 1677698 - 1679668 | 72635.4 |
| 1,4-alpha-glucan branching protein glgb | A6122_RS07640 | Not Available | Positive | 1679665 - 1682202 | 92526.9 |
| tetratricopeptide repeat protein | A6122_RS07645 | Not Available | Negative | 1682293 - 1683249 | 33248.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
