Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | A6122_RS07550 | Not Available | Negative | 1656357 - 1657637 | 46279.3 |
| tigr03086 family metal-binding protein | A6122_RS07555 | Not Available | Positive | 1657845 - 1658459 | 22339.8 |
| sdr family oxidoreductase | A6122_RS07560 | Not Available | Positive | 1658558 - 1659214 | 22592.6 |
| long-chain-fatty-acid--coa ligase | A6122_RS07565 | Not Available | Positive | 1659245 - 1660930 | 60848.6 |
| hypothetical protein | A6122_RS07570 | Not Available | Negative | 1660990 - 1661736 | 25655.1 |
| pspc domain-containing protein | A6122_RS07575 | Not Available | Negative | 1661783 - 1661965 | 6721.8 |
| asch domain-containing protein | A6122_RS07580 | Not Available | Negative | 1662014 - 1663051 | 36599.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | A6122_RS07585 | Not Available | Negative | 1663076 - 1664590 | 54155.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | A6122_RS07590 | Not Available | Negative | 1664590 - 1666137 | 53839.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | A6122_RS07595 | Not Available | Negative | 1666134 - 1666433 | 10500.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
