Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | A6122_RS07450 | Not Available | Negative | 1640184 - 1641866 | 61850.6 |
| cell wall-binding repeat-containing protein | A6122_RS07455 | Not Available | Negative | 1642127 - 1643989 | 62623.5 |
| duf6993 domain-containing protein | A6122_RS07460 | Not Available | Negative | 1644301 - 1644777 | 15822.6 |
| single-stranded dna-binding protein | A6122_RS07465 | Not Available | Negative | 1644823 - 1645380 | 19366.4 |
| peptide-methionine (s)-s-oxide reductase msra | A6122_RS07470 | Not Available | Negative | 1645559 - 1646086 | 19626.8 |
| aldo/keto reductase | A6122_RS07475 | Not Available | Positive | 1646207 - 1647214 | 36286.9 |
| hypothetical protein | A6122_RS07480 | Not Available | Positive | 1647301 - 1647537 | 8534.23 |
| hypothetical protein | A6122_RS07485 | Not Available | Positive | 1647610 - 1648632 | 36042.6 |
| Trna-arg | Not Available | Not Available | Positive | 1649113 - 1649185 | Not Available |
| sco4848 family membrane protein | A6122_RS07495 | Not Available | Negative | 1649417 - 1649638 | 7763.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
