Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | A6122_RS07400 | Not Available | Negative | 1630330 - 1630833 | 17860.8 |
| dsba family protein | A6122_RS07405 | Not Available | Negative | 1630905 - 1631504 | 22111.9 |
| aminopeptidase n | A6122_RS07410 | Not Available | Positive | 1631672 - 1634218 | 93244.1 |
| bifunctional 2-methylcitrate synthase/citrate synthase | A6122_RS07415 | Not Available | Negative | 1634246 - 1635382 | 41056.8 |
| methylisocitrate lyase | A6122_RS07420 | Not Available | Negative | 1635453 - 1636364 | 32623.2 |
| mechanosensitive ion channel family protein | A6122_RS07425 | Not Available | Positive | 1636479 - 1637567 | 38503.9 |
| globin | A6122_RS07430 | Not Available | Positive | 1637564 - 1637974 | 16028.9 |
| hypothetical protein | A6122_RS07435 | Not Available | Negative | 1637983 - 1638648 | 23470.0 |
| acyl-coa thioesterase ii | A6122_RS07440 | Not Available | Positive | 1638707 - 1639573 | 31717.5 |
| thioesterase family protein | A6122_RS07445 | Not Available | Negative | 1639711 - 1640184 | 17580.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
