Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | A6122_RS07300 | Not Available | Negative | 1608566 - 1611823 | 120630.0 |
| tetr/acrr family transcriptional regulator | A6122_RS07305 | Not Available | Positive | 1612234 - 1612791 | 19517.3 |
| valine--trna ligase | A6122_RS07310 | Not Available | Positive | 1612907 - 1615462 | 94076.6 |
| hypothetical protein | A6122_RS07315 | Not Available | Positive | 1615524 - 1615796 | 9851.31 |
| benzoate/h(+) symporter bene family transporter | A6122_RS07320 | Not Available | Negative | 1615936 - 1617129 | 39423.4 |
| atp-dependent clp protease atp-binding subunit clpx | A6122_RS07325 | Not Available | Negative | 1617229 - 1618506 | 46479.8 |
| atp-dependent clp protease proteolytic subunit | A6122_RS07330 | Not Available | Negative | 1618756 - 1619421 | 24087.7 |
| atp-dependent clp protease proteolytic subunit | A6122_RS07335 | Not Available | Negative | 1619456 - 1620046 | 21093.1 |
| trigger factor | A6122_RS07340 | Not Available | Negative | 1620232 - 1621728 | 53248.6 |
| Trna-pro | Not Available | Not Available | Positive | 1621809 - 1621886 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
