Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate--glucose phosphotransferase | A6122_RS07200 | Not Available | Positive | 1591206 - 1591955 | 26416.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1592179 - 1592556 | Not Available |
| zinc ribbon domain-containing protein | A6122_RS07210 | Not Available | Negative | 1592578 - 1593315 | 26952.9 |
| nif3-like dinuclear metal center hexameric protein | A6122_RS07215 | Not Available | Negative | 1593383 - 1594198 | 28209.4 |
| nuclease-related domain-containing protein | A6122_RS07220 | Not Available | Positive | 1594368 - 1595300 | 34037.4 |
| Trna-ala | Not Available | Not Available | Positive | 1595439 - 1595514 | Not Available |
| ribosome silencing factor | A6122_RS07230 | Not Available | Negative | 1595654 - 1596049 | 14372.0 |
| hypothetical protein | A6122_RS07235 | Not Available | Negative | 1596076 - 1597410 | 45604.3 |
| nicotinate-nucleotide adenylyltransferase | A6122_RS07240 | Not Available | Negative | 1597407 - 1598018 | 22281.3 |
| hypothetical protein | A6122_RS07245 | Not Available | Negative | 1598037 - 1598234 | 6824.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
