Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | A6122_RS07100 | Not Available | Negative | 1564682 - 1565806 | 39849.5 |
| dna topoisomerase (atp-hydrolyzing) subunit a | A6122_RS07105 | Not Available | Positive | 1565979 - 1568447 | 87768.9 |
| type iia dna topoisomerase subunit b | A6122_RS07110 | Not Available | Negative | 1568466 - 1570547 | 75460.2 |
| hypothetical protein | A6122_RS07115 | Not Available | Positive | 1570739 - 1570972 | 8477.79 |
| type 1 glutamine amidotransferase | A6122_RS16965 | Not Available | Negative | 1571025 - 1571738 | 24297.9 |
| mur ligase family protein | A6122_RS07125 | Not Available | Negative | 1571735 - 1573000 | 44587.4 |
| rna polymerase sigma factor | A6122_RS07130 | Not Available | Negative | 1573005 - 1574324 | 48083.9 |
| nitrate/nitrite transporter | A6122_RS07135 | Not Available | Negative | 1574617 - 1575945 | 46496.1 |
| proteasome assembly chaperone family protein | A6122_RS07140 | Not Available | Negative | 1575966 - 1576889 | 34168.5 |
| leucyl aminopeptidase | A6122_RS07145 | Not Available | Positive | 1576969 - 1578453 | 49503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
