Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase family protein | A6122_RS07050 | Not Available | Positive | 1552003 - 1553217 | 42775.1 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | A6122_RS07055 | Not Available | Positive | 1553221 - 1555344 | 76254.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | A6122_RS07060 | Not Available | Negative | 1555641 - 1557581 | 69497.8 |
| aconitate hydratase acna | A6122_RS07065 | Not Available | Negative | 1557699 - 1560509 | 101140.0 |
| duf3159 domain-containing protein | A6122_RS07070 | Not Available | Negative | 1560698 - 1561453 | 26244.3 |
| duf3710 domain-containing protein | A6122_RS07075 | Not Available | Negative | 1561459 - 1562082 | 22057.1 |
| dutp diphosphatase | A6122_RS07080 | Not Available | Negative | 1562079 - 1562552 | 16422.5 |
| duf3093 domain-containing protein | A6122_RS07085 | Not Available | Positive | 1562592 - 1563065 | 17023.7 |
| duf4193 domain-containing protein | A6122_RS07090 | Not Available | Negative | 1563062 - 1563355 | 10536.2 |
| septation protein seph | A6122_RS07095 | Not Available | Positive | 1563569 - 1564654 | 39863.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
