Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | A6122_RS06950 | Not Available | Positive | 1531340 - 1532152 | 29492.3 |
| carbohydrate kinase family protein | A6122_RS06960 | Not Available | Positive | 1532353 - 1533015 | 22253.7 |
| dihydrodipicolinate synthase family protein | A6122_RS17555 | Not Available | Positive | 1533151 - 1533474 | 10843.0 |
| dihydrodipicolinate synthase family protein | A6122_RS17560 | Not Available | Positive | 1533486 - 1534049 | 19808.9 |
| hypothetical protein | A6122_RS06970 | Not Available | Positive | 1534346 - 1534738 | 13513.8 |
| pepsy domain-containing protein | A6122_RS06975 | Not Available | Positive | 1534981 - 1536468 | 52782.2 |
| hypothetical protein | A6122_RS06980 | Not Available | Positive | 1536648 - 1537685 | 35915.1 |
| serine hydrolase | A6122_RS06985 | Not Available | Negative | 1537749 - 1539212 | 51896.5 |
| llm class flavin-dependent oxidoreductase | A6122_RS06990 | Not Available | Negative | 1539333 - 1540208 | 31742.2 |
| lamg-like jellyroll fold domain-containing protein | A6122_RS06995 | Not Available | Negative | 1540481 - 1542649 | 75044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
