Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 32 protein | A6122_RS06925 | Not Available | Negative | 1525394 - 1526458 | 38927.9 |
| duf2961 domain-containing protein | A6122_RS17115 | Not Available | Negative | 1526649 - 1527062 | 15020.6 |
| duf2961 domain-containing protein | A6122_RS17260 | Not Available | Negative | 1527188 - 1527340 | 5822.78 |
| hypothetical protein | A6122_RS17125 | Not Available | Negative | 1527493 - 1527831 | 12251.6 |
| laci family dna-binding transcriptional regulator | A6122_RS17265 | Not Available | Positive | 1527986 - 1528264 | 9891.67 |
| substrate-binding domain-containing protein | A6122_RS17135 | Not Available | Positive | 1528575 - 1528994 | 15176.3 |
| hypothetical protein | A6122_RS17270 | Not Available | Negative | 1529078 - 1529353 | 9278.76 |
| extracellular solute-binding protein | A6122_RS17275 | Not Available | Positive | 1529765 - 1530292 | 18435.2 |
| hypothetical protein | A6122_RS17140 | Not Available | Negative | 1530566 - 1530883 | 11542.5 |
| carbohydrate abc transporter permease | A6122_RS17145 | Not Available | Positive | 1530838 - 1531242 | 14648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
