Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | A6122_RS06825 | Not Available | Negative | 1503099 - 1504058 | 34290.6 |
| nfed family protein | A6122_RS06830 | Not Available | Negative | 1504055 - 1504522 | 16153.3 |
| sdr family oxidoreductase | A6122_RS06835 | Not Available | Positive | 1504697 - 1505455 | 26548.3 |
| glycoside hydrolase family 32 protein | A6122_RS06840 | Not Available | Negative | 1505667 - 1506905 | 45082.6 |
| glycoside hydrolase family 172 protein | A6122_RS06845 | Not Available | Negative | 1506902 - 1508257 | 51219.7 |
| laci family dna-binding transcriptional regulator | A6122_RS06850 | Not Available | Positive | 1508437 - 1509432 | 35821.7 |
| abc transporter substrate-binding protein | A6122_RS06855 | Not Available | Positive | 1509542 - 1510864 | 47057.7 |
| carbohydrate abc transporter permease | A6122_RS06860 | Not Available | Positive | 1510935 - 1511804 | 31587.5 |
| carbohydrate abc transporter permease | A6122_RS06865 | Not Available | Positive | 1511801 - 1512715 | 33263.7 |
| carbohydrate kinase family protein | A6122_RS06870 | Not Available | Positive | 1512712 - 1513575 | 28713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
