Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | A6122_RS16960 | Not Available | Positive | 1494687 - 1495697 | 36927.7 |
| yafy family protein | A6122_RS06785 | Not Available | Positive | 1495690 - 1496688 | 36111.8 |
| hypothetical protein | A6122_RS06790 | Not Available | Positive | 1496685 - 1497014 | 12689.5 |
| sec-independent protein translocase subunit tata | A6122_RS06795 | Not Available | Positive | 1497022 - 1497285 | 9191.12 |
| twin-arginine translocase subunit tatc | A6122_RS06800 | Not Available | Positive | 1497345 - 1498106 | 27597.9 |
| rna helicase | A6122_RS06805 | Not Available | Positive | 1498103 - 1500541 | 91382.4 |
| apolipoprotein n-acyltransferase | A6122_RS06810 | Not Available | Positive | 1500586 - 1502082 | 52865.6 |
| rna polymerase-binding protein rbpa | A6122_RS06815 | Not Available | Negative | 1502089 - 1502454 | 13784.2 |
| glycerophosphodiester phosphodiesterase family protein | A6122_RS17255 | Not Available | Negative | 1502566 - 1502784 | 7926.6 |
| glutamate-cysteine ligase family protein | A6122_RS17550 | Not Available | Negative | 1502969 - 1503079 | 3895.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
