Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | A6122_RS00630 | Not Available | Positive | 140559 - 141692 | 41252.7 |
| hypothetical protein | A6122_RS00635 | Not Available | Positive | 141689 - 142966 | 45850.4 |
| lipopolysaccharide biosynthesis protein | A6122_RS00640 | Not Available | Positive | 142963 - 144240 | 43680.7 |
| o-antigen ligase | A6122_RS00645 | Not Available | Positive | 144237 - 145784 | 54689.9 |
| polysaccharide biosynthesis tyrosine autokinase | A6122_RS00650 | Not Available | Negative | 145692 - 147032 | 45497.6 |
| sodium:proton antiporter | A6122_RS00655 | Not Available | Negative | 147224 - 148936 | 61078.3 |
| hypothetical protein | A6122_RS00660 | Not Available | Negative | 149158 - 149400 | 8237.58 |
| pspc domain-containing protein | A6122_RS00665 | Not Available | Negative | 149397 - 151028 | 55589.0 |
| atp-binding protein | A6122_RS00670 | Not Available | Positive | 151132 - 152295 | 40045.7 |
| response regulator transcription factor | A6122_RS00675 | Not Available | Positive | 152292 - 152933 | 22245.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
