Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | A6122_RS06680 | Not Available | Positive | 1468883 - 1471135 | 83466.5 |
| malto-oligosyltrehalose synthase | A6122_RS06685 | Not Available | Positive | 1471137 - 1473449 | 83582.9 |
| malto-oligosyltrehalose trehalohydrolase | A6122_RS06690 | Not Available | Positive | 1473501 - 1475294 | 65896.2 |
| hypothetical protein | A6122_RS06695 | Not Available | Negative | 1475300 - 1475755 | 16481.0 |
| error-prone dna polymerase | A6122_RS06700 | Not Available | Negative | 1475800 - 1479213 | 125219.0 |
| dna polymerase y family protein | A6122_RS06705 | Not Available | Negative | 1479264 - 1480862 | 57305.6 |
| hypothetical protein | A6122_RS06710 | Not Available | Negative | 1480864 - 1481583 | 25031.2 |
| glutamate 5-kinase | A6122_RS06715 | Not Available | Positive | 1481803 - 1483146 | 46238.6 |
| simpl domain-containing protein | A6122_RS06725 | Not Available | Positive | 1483559 - 1484209 | 23312.4 |
| hypothetical protein | A6122_RS16450 | Not Available | Positive | 1484587 - 1484994 | 14940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
