Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | A6122_RS06630 | Not Available | Negative | 1457139 - 1457849 | 25253.8 |
| maltose alpha-d-glucosyltransferase | A6122_RS06635 | Not Available | Negative | 1457969 - 1459684 | 65526.9 |
| alpha/beta fold hydrolase | A6122_RS06640 | Not Available | Positive | 1459849 - 1460760 | 32323.3 |
| glycosyltransferase family 1 protein | A6122_RS06645 | Not Available | Positive | 1460757 - 1461839 | 40565.1 |
| histidine phosphatase family protein | A6122_RS06650 | Not Available | Negative | 1461861 - 1462493 | 21818.9 |
| sir2 family nad-dependent protein deacetylase | A6122_RS06655 | Not Available | Negative | 1462532 - 1463401 | 31044.9 |
| rna methyltransferase | A6122_RS06660 | Not Available | Positive | 1463474 - 1464283 | 28820.1 |
| d-alanyl-d-alanine carboxypeptidase family protein | A6122_RS06665 | Not Available | Positive | 1464312 - 1465613 | 43702.5 |
| sgnh/gdsl hydrolase family protein | A6122_RS06670 | Not Available | Negative | 1465665 - 1466558 | 32816.7 |
| dead/deah box helicase | A6122_RS06675 | Not Available | Positive | 1466675 - 1468477 | 66044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
