Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS06585 | Not Available | Negative | 1449922 - 1450155 | 8709.5 |
| duf3099 domain-containing protein | A6122_RS06590 | Not Available | Negative | 1450152 - 1450493 | 11843.6 |
| beta-ketoacyl-acp reductase | A6122_RS06595 | Not Available | Positive | 1450624 - 1451334 | 24567.4 |
| hypothetical protein | A6122_RS16445 | Not Available | Negative | 1451347 - 1451520 | 5985.48 |
| phosphoserine phosphatase serb | A6122_RS06600 | Not Available | Negative | 1451940 - 1452599 | 22559.2 |
| glucose-1-phosphate adenylyltransferase | A6122_RS06605 | Not Available | Negative | 1452659 - 1453918 | 45323.9 |
| glycogen synthase | A6122_RS06610 | Not Available | Positive | 1453995 - 1455176 | 42059.2 |
| abc transporter atp-binding protein | A6122_RS06615 | Not Available | Positive | 1455209 - 1455994 | 28353.8 |
| type b 50s ribosomal protein l31 | A6122_RS06620 | Not Available | Positive | 1456154 - 1456402 | 9223.88 |
| ydei family protein | A6122_RS06625 | Not Available | Positive | 1456562 - 1457134 | 21447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
