Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf885 domain-containing protein | A6122_RS06435 | Not Available | Positive | 1412936 - 1414612 | 60623.4 |
| 30s ribosomal protein s1 | A6122_RS06440 | Not Available | Positive | 1414861 - 1416315 | 53113.5 |
| dephospho-coa kinase | A6122_RS06445 | Not Available | Positive | 1416421 - 1417017 | 20962.0 |
| excinuclease abc subunit uvrb | A6122_RS06450 | Not Available | Positive | 1417287 - 1419353 | 77342.3 |
| excinuclease abc subunit uvra | A6122_RS06455 | Not Available | Positive | 1419542 - 1422367 | 103229.0 |
| excinuclease abc subunit uvrc | A6122_RS06460 | Not Available | Positive | 1422382 - 1424277 | 70492.2 |
| rnase adapter rapz | A6122_RS06465 | Not Available | Positive | 1424356 - 1425231 | 31965.1 |
| dna-binding protein whia | A6122_RS06470 | Not Available | Positive | 1425274 - 1426254 | 35059.2 |
| superoxide dismutase | A6122_RS06475 | Not Available | Positive | 1426458 - 1427084 | 23035.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | A6122_RS06480 | Not Available | Positive | 1427184 - 1428191 | 35635.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
