Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | A6122_RS06340 | Not Available | Positive | 1389206 - 1390177 | 35575.9 |
| glutamate synthase large subunit | A6122_RS06345 | Not Available | Positive | 1390414 - 1395006 | 166175.0 |
| glutamate synthase subunit beta | A6122_RS06350 | Not Available | Positive | 1394999 - 1396456 | 52676.6 |
| pyruvate kinase | A6122_RS06355 | Not Available | Positive | 1396552 - 1397997 | 51634.0 |
| exopolyphosphatase | A6122_RS06360 | Not Available | Positive | 1398109 - 1399077 | 34108.1 |
| aldose 1-epimerase family protein | A6122_RS06365 | Not Available | Negative | 1399056 - 1399940 | 32224.1 |
| dead/deah box helicase | A6122_RS06370 | Not Available | Positive | 1400005 - 1403022 | 111145.0 |
| oxygenase mpab family protein | A6122_RS06375 | Not Available | Positive | 1403086 - 1403940 | 30780.9 |
| tetr/acrr family transcriptional regulator | A6122_RS06380 | Not Available | Positive | 1403986 - 1404669 | 23824.1 |
| card family transcriptional regulator | A6122_RS06385 | Not Available | Positive | 1404669 - 1405157 | 17821.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
