Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | A6122_RS06290 | Not Available | Positive | 1381920 - 1382588 | 24117.7 |
| phosphoribosyl-atp diphosphatase | A6122_RS06295 | Not Available | Positive | 1382939 - 1383202 | 9724.6 |
| atp phosphoribosyltransferase | A6122_RS06300 | Not Available | Positive | 1383337 - 1384176 | 29857.9 |
| imidazole glycerol phosphate synthase subunit hisf | A6122_RS06305 | Not Available | Positive | 1384189 - 1384950 | 26346.1 |
| phosphoribosyl-amp cyclohydrolase | A6122_RS06310 | Not Available | Positive | 1384947 - 1385315 | 13499.9 |
| trp biosynthesis-associated membrane protein | A6122_RS06315 | Not Available | Positive | 1385318 - 1385947 | 20838.1 |
| duf6704 family protein | A6122_RS06320 | Not Available | Positive | 1386085 - 1386318 | 7936.61 |
| indole-3-glycerol phosphate synthase trpc | A6122_RS06325 | Not Available | Positive | 1386318 - 1387091 | 27217.8 |
| tryptophan synthase subunit beta | A6122_RS06330 | Not Available | Positive | 1387112 - 1388323 | 42931.0 |
| tryptophan synthase subunit alpha | A6122_RS06335 | Not Available | Positive | 1388320 - 1389120 | 27552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
