Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS00580 | Not Available | Negative | 129030 - 129422 | 14461.7 |
| putative quinol monooxygenase | A6122_RS00585 | Not Available | Negative | 129647 - 129940 | 10874.8 |
| atp-binding cassette domain-containing protein | A6122_RS00590 | Not Available | Negative | 129937 - 130734 | 27972.0 |
| abc transporter permease | A6122_RS00595 | Not Available | Negative | 130731 - 131777 | 36175.1 |
| substrate-binding domain-containing protein | A6122_RS00600 | Not Available | Negative | 131849 - 132943 | 36992.0 |
| laci family dna-binding transcriptional regulator | A6122_RS00605 | Not Available | Positive | 133095 - 134093 | 35076.0 |
| gh32 c-terminal domain-containing protein | A6122_RS00610 | Not Available | Positive | 134221 - 137451 | 112348.0 |
| glycosyltransferase family 2 protein | A6122_RS00615 | Not Available | Negative | 137543 - 138532 | 35750.2 |
| glycosyltransferase family 1 protein | A6122_RS16880 | Not Available | Negative | 138529 - 139419 | 32131.1 |
| pr6pr family membrane protein | A6122_RS16885 | Not Available | Positive | 139744 - 140418 | 24077.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
