Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | A6122_RS06240 | Not Available | Positive | 1368289 - 1369533 | 44572.2 |
| carbamoyl-phosphate synthase large subunit | A6122_RS06245 | Not Available | Positive | 1369533 - 1372823 | 118209.0 |
| orotidine-5'-phosphate decarboxylase | A6122_RS06250 | Not Available | Positive | 1372823 - 1373701 | 29525.0 |
| guanylate kinase | A6122_RS06255 | Not Available | Positive | 1373745 - 1374671 | 33724.4 |
| dna-directed rna polymerase subunit omega | A6122_RS06260 | Not Available | Positive | 1374795 - 1375049 | 9264.96 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | A6122_RS06265 | Not Available | Positive | 1375060 - 1376286 | 42001.7 |
| methionine adenosyltransferase | A6122_RS06270 | Not Available | Positive | 1376404 - 1377609 | 42892.4 |
| primosomal protein n' | A6122_RS06275 | Not Available | Positive | 1377651 - 1379588 | 68423.3 |
| methionyl-trna formyltransferase | A6122_RS06280 | Not Available | Positive | 1379606 - 1380511 | 31002.5 |
| rsmb/nop family class i sam-dependent rna methyltransferase | A6122_RS06285 | Not Available | Positive | 1380508 - 1381881 | 47625.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
