Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6966 domain-containing protein | A6122_RS16435 | Not Available | Negative | 1355443 - 1355778 | 12462.0 |
| transposase family protein | A6122_RS06195 | Not Available | Positive | 1356614 - 1357369 | 28640.2 |
| mafi family immunity protein | A6122_RS06200 | Not Available | Negative | 1357557 - 1357838 | 10771.8 |
| duf6531 domain-containing protein | A6122_RS06205 | Not Available | Negative | 1357848 - 1363418 | 196310.0 |
| elongation factor p | A6122_RS06210 | Not Available | Positive | 1363640 - 1364200 | 20330.0 |
| transcription antitermination factor nusb | A6122_RS06215 | Not Available | Positive | 1364213 - 1364632 | 15083.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | A6122_RS06220 | Not Available | Positive | 1364828 - 1365385 | 20164.3 |
| aspartate carbamoyltransferase catalytic subunit | A6122_RS06225 | Not Available | Positive | 1365382 - 1366341 | 34277.1 |
| dihydroorotase | A6122_RS06230 | Not Available | Positive | 1366338 - 1367738 | 48622.6 |
| hypothetical protein | A6122_RS06235 | Not Available | Positive | 1367731 - 1368285 | 19681.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
