Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | A6122_RS06105 | Not Available | Negative | 1337718 - 1338488 | 26071.2 |
| replication-associated recombination protein a | A6122_RS06110 | Not Available | Positive | 1338663 - 1340111 | 51605.1 |
| 30s ribosomal protein s4 | A6122_RS06115 | Not Available | Positive | 1340336 - 1340965 | 23744.8 |
| duf948 domain-containing protein | A6122_RS06120 | Not Available | Positive | 1341354 - 1341770 | 14033.1 |
| hypothetical protein | A6122_RS06125 | Not Available | Positive | 1341860 - 1342051 | 6708.09 |
| alanine--trna ligase | A6122_RS06130 | Not Available | Positive | 1342105 - 1344762 | 94816.8 |
| glutamate-cysteine ligase family protein | A6122_RS06135 | Not Available | Positive | 1344763 - 1345224 | 15841.8 |
| endolytic transglycosylase mltg | A6122_RS06140 | Not Available | Positive | 1345247 - 1346545 | 46250.0 |
| shikimate dehydrogenase | A6122_RS06145 | Not Available | Positive | 1346542 - 1347390 | 29101.2 |
| chorismate synthase | A6122_RS06150 | Not Available | Positive | 1347413 - 1348630 | 42539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
