Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | A6122_RS06005 | Not Available | Negative | 1316816 - 1317904 | 39135.2 |
| cynx/nimt family mfs transporter | A6122_RS06010 | Not Available | Negative | 1317973 - 1319163 | 40215.1 |
| duf4190 domain-containing protein | A6122_RS06015 | Not Available | Negative | 1319192 - 1319641 | 15046.0 |
| threonine--trna ligase | A6122_RS06020 | Not Available | Positive | 1319894 - 1321885 | 74466.1 |
| hit domain-containing protein | A6122_RS06025 | Not Available | Positive | 1321888 - 1322448 | 20157.0 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | A6122_RS06030 | Not Available | Positive | 1322500 - 1323417 | 31961.3 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | A6122_RS06035 | Not Available | Positive | 1323449 - 1324063 | 21838.3 |
| dna-formamidopyrimidine glycosylase family protein | A6122_RS06040 | Not Available | Positive | 1324126 - 1324986 | 30543.2 |
| hnh endonuclease signature motif containing protein | A6122_RS06045 | Not Available | Negative | 1325021 - 1326358 | 47787.7 |
| yebc/pmpr family dna-binding transcriptional regulator | A6122_RS06050 | Not Available | Positive | 1326623 - 1327384 | 27282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
