Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | A6122_RS05860 | Not Available | Positive | 1287524 - 1291036 | 129504.0 |
| histidinol dehydrogenase | A6122_RS05865 | Not Available | Positive | 1291393 - 1292697 | 44829.2 |
| transcriptional regulator nrdr | A6122_RS05870 | Not Available | Positive | 1292714 - 1293190 | 17579.8 |
| quinone-dependent dihydroorotate dehydrogenase | A6122_RS05875 | Not Available | Positive | 1293198 - 1294217 | 36065.1 |
| duf3043 domain-containing protein | A6122_RS05880 | Not Available | Negative | 1294254 - 1294823 | 21527.6 |
| dipeptidase | A6122_RS05885 | Not Available | Positive | 1294866 - 1296281 | 49661.2 |
| iron-sulfur cluster insertion protein erpa | A6122_RS05890 | Not Available | Positive | 1296377 - 1296760 | 13417.6 |
| cytochrome c oxidase subunit ii | A6122_RS05895 | Not Available | Positive | 1296925 - 1297806 | 33015.4 |
| cytochrome c oxidase subunit i | A6122_RS05900 | Not Available | Positive | 1297813 - 1299537 | 63842.5 |
| cytochrome c oxidase subunit 4 | A6122_RS05905 | Not Available | Positive | 1299542 - 1299958 | 15204.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
