Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | A6122_RS15380 | Not Available | Positive | 115030 - 115800 | 28017.8 |
| nuclear transport factor 2 family protein | A6122_RS00535 | Not Available | Negative | 115825 - 116178 | 13385.7 |
| amp-binding protein | A6122_RS00540 | Not Available | Negative | 116193 - 119135 | 106093.0 |
| gnat family n-acetyltransferase | A6122_RS00545 | Not Available | Positive | 119190 - 119666 | 17106.2 |
| isl3 family transposase | A6122_RS00550 | Not Available | Negative | 120166 - 121476 | 48672.6 |
| thioesterase ii family protein | A6122_RS00555 | Not Available | Positive | 121943 - 122650 | 25530.4 |
| sdr family oxidoreductase | A6122_RS00560 | Not Available | Positive | 122647 - 123474 | 28660.2 |
| non-ribosomal peptide synthetase | A6122_RS00565 | Not Available | Positive | 123595 - 126393 | 98828.8 |
| glutamate-cysteine ligase family protein | A6122_RS00570 | Not Available | Positive | 126637 - 127913 | 45019.2 |
| hypothetical protein | A6122_RS00575 | Not Available | Negative | 128418 - 128993 | 21878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
