Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3040 domain-containing protein | A6122_RS05760 | Not Available | Positive | 1267267 - 1267656 | 13700.7 |
| division/cell wall cluster transcriptional repressor mraz | A6122_RS05765 | Not Available | Positive | 1267896 - 1268327 | 16127.2 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | A6122_RS05770 | Not Available | Positive | 1268437 - 1269420 | 35867.9 |
| hypothetical protein | A6122_RS05775 | Not Available | Positive | 1269417 - 1269977 | 18731.3 |
| penicillin-binding protein 2 | A6122_RS05780 | Not Available | Positive | 1270015 - 1271787 | 62741.2 |
| mur ligase family protein | A6122_RS05785 | Not Available | Positive | 1271838 - 1273400 | 55257.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | A6122_RS05790 | Not Available | Positive | 1273401 - 1274825 | 49725.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | A6122_RS05795 | Not Available | Positive | 1274822 - 1275916 | 39253.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | A6122_RS05800 | Not Available | Positive | 1275913 - 1277448 | 54255.5 |
| putative lipid ii flippase ftsw | A6122_RS05805 | Not Available | Positive | 1277402 - 1278661 | 44304.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
