Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | A6122_RS05660 | Not Available | Negative | 1244950 - 1245402 | 16025.1 |
| nudix hydrolase | A6122_RS05665 | Not Available | Positive | 1245466 - 1246383 | 32263.3 |
| thioredoxin | A6122_RS05670 | Not Available | Positive | 1246412 - 1246783 | 13405.8 |
| phosphoenolpyruvate carboxylase | A6122_RS05675 | Not Available | Negative | 1246855 - 1249455 | 94773.7 |
| glucose-6-phosphate dehydrogenase | A6122_RS05680 | Not Available | Positive | 1249614 - 1251077 | 54187.7 |
| cdp-alcohol phosphatidyltransferase family protein | A6122_RS05685 | Not Available | Positive | 1251112 - 1251732 | 22294.6 |
| fha domain-containing protein | A6122_RS05690 | Not Available | Positive | 1251818 - 1252231 | 14657.1 |
| merr family transcriptional regulator | A6122_RS05695 | Not Available | Positive | 1252235 - 1252939 | 24445.5 |
| merr family transcriptional regulator | A6122_RS05700 | Not Available | Positive | 1253079 - 1253624 | 19685.4 |
| para family protein | A6122_RS05705 | Not Available | Negative | 1253669 - 1254478 | 28931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
