Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | A6122_RS05610 | Not Available | Negative | 1237158 - 1238273 | 38494.0 |
| lrp/asnc family transcriptional regulator | A6122_RS05615 | Not Available | Positive | 1238440 - 1238925 | 17493.0 |
| hypothetical protein | A6122_RS05620 | Not Available | Negative | 1238963 - 1239220 | 9229.85 |
| mismatch-specific dna-glycosylase | A6122_RS05625 | Not Available | Positive | 1239283 - 1239888 | 21212.2 |
| llm class flavin-dependent oxidoreductase | A6122_RS05630 | Not Available | Positive | 1239924 - 1240958 | 37486.6 |
| dnaj domain-containing protein | A6122_RS05635 | Not Available | Positive | 1241017 - 1241937 | 33065.9 |
| tigr03557 family f420-dependent llm class oxidoreductase | A6122_RS05640 | Not Available | Positive | 1242052 - 1243032 | 35466.6 |
| rna-binding s4 domain-containing protein | A6122_RS05645 | Not Available | Negative | 1243045 - 1243422 | 13727.6 |
| hypothetical protein | A6122_RS05650 | Not Available | Positive | 1243515 - 1244042 | 17988.5 |
| aminotransferase class iv | A6122_RS05655 | Not Available | Negative | 1244076 - 1244960 | 30628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
