Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS05560 | Not Available | Positive | 1229617 - 1230717 | 36707.4 |
| abc transporter atp-binding protein | A6122_RS05565 | Not Available | Positive | 1230714 - 1231670 | 33474.4 |
| abc transporter permease | A6122_RS05570 | Not Available | Positive | 1231657 - 1232496 | 28424.5 |
| hypothetical protein | A6122_RS05575 | Not Available | Negative | 1232512 - 1232796 | 9504.05 |
| ychj family protein | A6122_RS05580 | Not Available | Positive | 1232942 - 1233340 | 15000.5 |
| gnat family n-acetyltransferase | A6122_RS05585 | Not Available | Positive | 1233258 - 1233656 | 14037.5 |
| nad(p)h-hydrate epimerase | A6122_RS05590 | Not Available | Negative | 1233682 - 1234413 | 24921.0 |
| fadr/gntr family transcriptional regulator | A6122_RS05595 | Not Available | Negative | 1234413 - 1235108 | 24737.3 |
| gntp family permease | A6122_RS05600 | Not Available | Positive | 1235228 - 1236637 | 46936.2 |
| gluconokinase | A6122_RS05605 | Not Available | Positive | 1236637 - 1237161 | 18663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
