Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scpa family protein | A6122_RS05405 | Not Available | Positive | 1200212 - 1201036 | 30035.0 |
| smc-scp complex subunit scpb | A6122_RS05410 | Not Available | Positive | 1201026 - 1201607 | 20779.8 |
| glutamate-cysteine ligase family protein | A6122_RS05415 | Not Available | Positive | 1201594 - 1202346 | 27271.9 |
| prephenate dehydrogenase | A6122_RS05420 | Not Available | Positive | 1202551 - 1203657 | 38506.2 |
| (d)cmp kinase | A6122_RS05425 | Not Available | Positive | 1203654 - 1204493 | 30191.1 |
| ribosome biogenesis gtpase der | A6122_RS05430 | Not Available | Positive | 1204468 - 1205988 | 55711.2 |
| tetr/acrr family transcriptional regulator | A6122_RS05435 | Not Available | Negative | 1206063 - 1206629 | 20046.9 |
| Trna-pro | Not Available | Not Available | Positive | 1206803 - 1206876 | Not Available |
| duf3806 domain-containing protein | A6122_RS05445 | Not Available | Positive | 1207063 - 1207554 | 18029.4 |
| duf3375 domain-containing protein | A6122_RS05455 | Not Available | Positive | 1208042 - 1209514 | 53412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
