Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 1188623 - 1191739 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1191924 - 1192040 | Not Available |
| hypothetical protein | A6122_RS05365 | Not Available | Positive | 1192171 - 1192377 | 7666.7 |
| tlya family rna methyltransferase | A6122_RS05370 | Not Available | Positive | 1192374 - 1193180 | 28227.7 |
| nad kinase | A6122_RS05375 | Not Available | Positive | 1193228 - 1194151 | 32754.2 |
| dna repair protein recn | A6122_RS05380 | Not Available | Positive | 1194158 - 1195846 | 59197.8 |
| ctp synthase | A6122_RS05385 | Not Available | Positive | 1196036 - 1197700 | 60415.9 |
| nudix hydrolase | A6122_RS05390 | Not Available | Positive | 1197693 - 1198328 | 23700.7 |
| site-specific tyrosine recombinase xerd | A6122_RS05395 | Not Available | Positive | 1198325 - 1199233 | 33251.0 |
| para family protein | A6122_RS05400 | Not Available | Positive | 1199341 - 1200228 | 31721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
