Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | A6122_RS05310 | Not Available | Positive | 1177423 - 1178376 | 33606.3 |
| acetylornithine transaminase | A6122_RS05315 | Not Available | Positive | 1178469 - 1179671 | 41491.9 |
| ornithine carbamoyltransferase | A6122_RS05320 | Not Available | Positive | 1179703 - 1180647 | 33403.6 |
| argininosuccinate lyase | A6122_RS05325 | Not Available | Positive | 1180674 - 1182116 | 51038.6 |
| hypothetical protein | A6122_RS16425 | Not Available | Positive | 1182113 - 1182253 | 4877.08 |
| dna-3-methyladenine glycosylase | A6122_RS05330 | Not Available | Positive | 1182256 - 1182861 | 21002.2 |
| hypothetical protein | A6122_RS05335 | Not Available | Negative | 1182885 - 1183514 | 20629.6 |
| hypothetical protein | A6122_RS05340 | Not Available | Negative | 1183511 - 1184146 | 22781.9 |
| tyrosine--trna ligase | A6122_RS05345 | Not Available | Positive | 1184249 - 1185559 | 47541.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1186319 - 1187841 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
