Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | A6122_RS05260 | Not Available | Positive | 1166528 - 1166914 | 14407.5 |
| rna methyltransferase | A6122_RS05265 | Not Available | Positive | 1167033 - 1167833 | 28300.8 |
| amino acid abc transporter atp-binding protein | A6122_RS05270 | Not Available | Positive | 1167945 - 1168724 | 27765.7 |
| glutamate abc transporter substrate-binding protein | A6122_RS05275 | Not Available | Positive | 1168824 - 1169717 | 30842.6 |
| amino acid abc transporter permease | A6122_RS05280 | Not Available | Positive | 1169801 - 1170448 | 23272.1 |
| amino acid abc transporter permease | A6122_RS05285 | Not Available | Positive | 1170445 - 1171335 | 31871.9 |
| phenylalanine--trna ligase subunit alpha | A6122_RS05290 | Not Available | Positive | 1171573 - 1172613 | 37962.8 |
| phenylalanine--trna ligase subunit beta | A6122_RS05295 | Not Available | Positive | 1172613 - 1175144 | 88256.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | A6122_RS05300 | Not Available | Positive | 1175209 - 1176258 | 35741.8 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | A6122_RS05305 | Not Available | Positive | 1176255 - 1177415 | 39571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
