Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor lexa | A6122_RS05210 | Not Available | Negative | 1159290 - 1159994 | 25051.1 |
| lysm peptidoglycan-binding domain-containing protein | A6122_RS05215 | Not Available | Positive | 1160284 - 1160748 | 15969.7 |
| histidinol-phosphate transaminase | A6122_RS05220 | Not Available | Positive | 1160778 - 1161893 | 39272.8 |
| imidazoleglycerol-phosphate dehydratase hisb | A6122_RS05225 | Not Available | Positive | 1161939 - 1162559 | 21623.8 |
| imidazole glycerol phosphate synthase subunit hish | A6122_RS05230 | Not Available | Positive | 1162556 - 1163203 | 22817.2 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | A6122_RS05235 | Not Available | Positive | 1163257 - 1164003 | 26082.9 |
| sseb family protein | A6122_RS05240 | Not Available | Positive | 1163987 - 1164775 | 26971.9 |
| duf1844 domain-containing protein | A6122_RS05245 | Not Available | Negative | 1164783 - 1165178 | 13779.0 |
| translation initiation factor if-3 | A6122_RS05250 | Not Available | Positive | 1165564 - 1166163 | 22371.9 |
| 50s ribosomal protein l35 | A6122_RS05255 | Not Available | Positive | 1166261 - 1166455 | 7131.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
