Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS05060 | Not Available | Positive | 1124559 - 1124999 | 15898.1 |
| polyribonucleotide nucleotidyltransferase | A6122_RS05065 | Not Available | Positive | 1125392 - 1127650 | 80141.3 |
| aldo/keto reductase | A6122_RS05070 | Not Available | Positive | 1127763 - 1128767 | 35260.8 |
| alpha-glucosidase | A6122_RS05075 | Not Available | Negative | 1128853 - 1130610 | 64986.6 |
| aldo/keto reductase | A6122_RS05080 | Not Available | Positive | 1130800 - 1131912 | 38424.0 |
| pitrilysin family protein | A6122_RS05085 | Not Available | Positive | 1132004 - 1133401 | 48875.7 |
| histidine phosphatase family protein | A6122_RS05090 | Not Available | Positive | 1133460 - 1134062 | 22340.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | A6122_RS05095 | Not Available | Positive | 1134336 - 1135169 | 28507.0 |
| hypothetical protein | A6122_RS05100 | Not Available | Positive | 1135166 - 1135612 | 16084.8 |
| tigr01777 family oxidoreductase | A6122_RS05105 | Not Available | Negative | 1135689 - 1136717 | 37081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
