Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m4 family metallopeptidase | A6122_RS05010 | Not Available | Negative | 1116010 - 1117074 | 37811.7 |
| molybdopterin-dependent oxidoreductase | A6122_RS05015 | Not Available | Positive | 1117218 - 1117802 | 21995.1 |
| ferredoxin reductase | A6122_RS05020 | Not Available | Positive | 1117808 - 1118527 | 25397.2 |
| glycoside hydrolase | A6122_RS05025 | Not Available | Positive | 1118597 - 1120612 | 71619.2 |
| pyridoxamine 5'-phosphate oxidase family protein | A6122_RS05030 | Not Available | Negative | 1120697 - 1121203 | 18079.1 |
| hypothetical protein | A6122_RS05035 | Not Available | Positive | 1121279 - 1121557 | 9980.07 |
| mfs transporter | A6122_RS05040 | Not Available | Negative | 1121597 - 1122481 | 29837.3 |
| hypothetical protein | A6122_RS05045 | Not Available | Positive | 1122568 - 1123122 | 19309.5 |
| 30s ribosomal protein s15 | A6122_RS05050 | Not Available | Positive | 1123234 - 1123503 | 10303.5 |
| hypothetical protein | A6122_RS05055 | Not Available | Negative | 1123610 - 1124422 | 26966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
