Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | A6122_RS04960 | Not Available | Negative | 1105775 - 1106149 | 13787.3 |
| duf4870 domain-containing protein | A6122_RS04965 | Not Available | Negative | 1106333 - 1106764 | 15671.4 |
| duf4190 domain-containing protein | A6122_RS15685 | Not Available | Positive | 1106980 - 1107426 | 15330.8 |
| aspartate ammonia-lyase | A6122_RS04975 | Not Available | Positive | 1107699 - 1109099 | 49521.6 |
| dna-3-methyladenine glycosylase 2 family protein | A6122_RS04980 | Not Available | Negative | 1109074 - 1110522 | 50333.5 |
| prsw family intramembrane metalloprotease | A6122_RS04985 | Not Available | Positive | 1110732 - 1111853 | 39474.6 |
| duf1684 domain-containing protein | A6122_RS04990 | Not Available | Negative | 1111875 - 1112660 | 28441.0 |
| uvrd-helicase domain-containing protein | A6122_RS04995 | Not Available | Positive | 1113000 - 1115243 | 82486.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | A6122_RS05000 | Not Available | Positive | 1115296 - 1115670 | 13169.6 |
| protealysin inhibitor emfourin | A6122_RS05005 | Not Available | Negative | 1115698 - 1115967 | 10253.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
