Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | A6122_RS04905 | Not Available | Positive | 1095146 - 1096690 | 55980.3 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS04910 | Not Available | Positive | 1096693 - 1097673 | 34089.4 |
| Trna-gln | Not Available | Not Available | Positive | 1097765 - 1097839 | Not Available |
| hypothetical protein | A6122_RS04920 | Not Available | Positive | 1098501 - 1099406 | 32009.7 |
| dna/rna helicase domain-containing protein | A6122_RS04925 | Not Available | Negative | 1099572 - 1099868 | 11077.2 |
| duf4190 domain-containing protein | A6122_RS04930 | Not Available | Positive | 1100058 - 1100411 | 12020.1 |
| n-acetyltransferase | A6122_RS04940 | Not Available | Negative | 1100695 - 1101162 | 16735.8 |
| apc family permease | A6122_RS04945 | Not Available | Negative | 1101186 - 1102529 | 46101.4 |
| plasmid pria4b orf-3 family protein | A6122_RS04950 | Not Available | Positive | 1102723 - 1104561 | 65222.7 |
| nad(p)h-quinone oxidoreductase | A6122_RS04955 | Not Available | Negative | 1104646 - 1105623 | 33345.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
