Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | A6122_RS04805 | Not Available | Positive | 1075152 - 1076201 | 36648.6 |
| branched-chain amino acid aminotransferase | A6122_RS04810 | Not Available | Positive | 1076227 - 1077342 | 40336.5 |
| fumarylacetoacetate hydrolase family protein | A6122_RS04815 | Not Available | Positive | 1077339 - 1078124 | 27711.9 |
| hypothetical protein | A6122_RS04820 | Not Available | Negative | 1078246 - 1078512 | 8208.83 |
| recq family atp-dependent dna helicase | A6122_RS04825 | Not Available | Positive | 1078704 - 1080338 | 58407.6 |
| duf2795 domain-containing protein | A6122_RS04830 | Not Available | Negative | 1080432 - 1080623 | 6737.83 |
| glycosyltransferase family 2 protein | A6122_RS04835 | Not Available | Negative | 1080647 - 1081516 | 32250.2 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | A6122_RS04840 | Not Available | Negative | 1081513 - 1082985 | 51144.6 |
| aldehyde dehydrogenase | A6122_RS04845 | Not Available | Negative | 1082982 - 1084298 | 44621.9 |
| hypothetical protein | A6122_RS04850 | Not Available | Negative | 1084391 - 1084804 | 15018.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
